Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdhb6Q91XZ4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm15371-201ENSMUST00000117057 784 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm6983-201ENSMUST00000214912 628 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm15823-201ENSMUST00000064305 670 ntBASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb6Q91XZ4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Gm44397-201ENSMUST00000195950 113 ntBASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pcdhb6Q91XZ4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms