Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gm15370-201ENSMUST00000117158 253 ntBASIC15.26■□□□□ 0.03
Trex1Q91XB0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.26■□□□□ 0.03
Trex1Q91XB0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trex1Q91XB0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.25■□□□□ 0.03
Trex1Q91XB0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.25■□□□□ 0.03
Trex1Q91XB0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.25■□□□□ 0.03
Trex1Q91XB0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gm2991-201ENSMUST00000173338 480 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gm37042-201ENSMUST00000193816 581 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gm6458-201ENSMUST00000211573 635 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.24■□□□□ 0.03
Trex1Q91XB0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trex1Q91XB0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms