Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Mir698-201ENSMUST00000102164 109 ntBASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Mir3113-201ENSMUST00000175478 76 ntBASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc58Q8R3Q6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Gm8116-201ENSMUST00000182917 1201 ntBASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Gm45683-201ENSMUST00000210825 1247 ntBASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Mir125a-201ENSMUST00000083545 68 ntBASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Nrn1-204ENSMUST00000224323 1779 ntBASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc58Q8R3Q6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc58Q8R3Q6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms