Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afjQ8R1M2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gm12428-201ENSMUST00000119844 727 ntBASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gm22175-201ENSMUST00000175007 78 ntBASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afjQ8R1M2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm12585-201ENSMUST00000117307 290 ntBASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm17837-201ENSMUST00000186435 985 ntBASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2afjQ8R1M2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afjQ8R1M2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms