Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm12928-201ENSMUST00000117115 573 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm26315-201ENSMUST00000083890 321 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sf3a1Q8K4Z5 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Gm11424-201ENSMUST00000121929 829 ntBASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sf3a1Q8K4Z5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sf3a1Q8K4Z5 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms