Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc87Q8CDL9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Gm15678-201ENSMUST00000117573 960 ntBASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Gm7775-201ENSMUST00000218871 853 ntBASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc87Q8CDL9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc87Q8CDL9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Gm27321-201ENSMUST00000185021 205 ntBASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc87Q8CDL9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc87Q8CDL9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms