Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Mir7684-201ENSMUST00000183858 60 ntBASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrif1Q8CDD9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm13823-201ENSMUST00000119930 345 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrif1Q8CDD9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lrif1Q8CDD9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms