Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh20Q8BIZ0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh20Q8BIZ0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.08□□□□□ -0.31
Pcdh20Q8BIZ0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdh20Q8BIZ0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Pcdh20Q8BIZ0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdh20Q8BIZ0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdh20Q8BIZ0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm22189-201ENSMUST00000103822 86 ntBASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdh20Q8BIZ0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms