Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc40Q8BI79 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gm18041-201ENSMUST00000218210 618 ntBASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc40Q8BI79 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14□□□□□ -0.17
Ccdc40Q8BI79 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc40Q8BI79 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc40Q8BI79 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms