Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm15678-201ENSMUST00000117573 960 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm14928-201ENSMUST00000120198 477 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm18018-201ENSMUST00000198273 408 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Atg4bQ8BGE6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atg4bQ8BGE6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.59□□□□□ -0.39
Atg4bQ8BGE6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms