Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.38□□□□□ -0.43
Pif1Q80SX8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm38144-201ENSMUST00000192790 465 ntBASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm19184-201ENSMUST00000196798 928 ntBASIC12.38□□□□□ -0.43
Pif1Q80SX8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm17330-201ENSMUST00000221047 165 ntBASIC12.38□□□□□ -0.43
Pif1Q80SX8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.38□□□□□ -0.43
Pif1Q80SX8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pif1Q80SX8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.37□□□□□ -0.43
Pif1Q80SX8 Gm9257-201ENSMUST00000221254 232 ntBASIC12.37□□□□□ -0.43
Pif1Q80SX8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.37□□□□□ -0.43
Pif1Q80SX8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.37□□□□□ -0.43
Pif1Q80SX8 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.37□□□□□ -0.43
Pif1Q80SX8 Gm26315-201ENSMUST00000083890 321 ntBASIC12.37□□□□□ -0.43
Pif1Q80SX8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pif1Q80SX8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pif1Q80SX8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms