Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm12241-201ENSMUST00000118330 726 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm37259-201ENSMUST00000193903 849 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm45865-201ENSMUST00000211815 945 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox11Q7M6Y2 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox11Q7M6Y2 Gm22323-201ENSMUST00000103832 109 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm13786-201ENSMUST00000122371 333 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm16379-201ENSMUST00000161469 348 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm29396-201ENSMUST00000185659 716 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm8762-201ENSMUST00000193486 339 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox11Q7M6Y2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox11Q7M6Y2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms