Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Gm14017-201ENSMUST00000121934 386 ntBASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Gm30285-201ENSMUST00000214614 422 ntBASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Snrnp40Q6PE01 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm13316-201ENSMUST00000140537 691 ntBASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm24990-201ENSMUST00000157406 323 ntBASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Snrnp40Q6PE01 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 Gm12176-201ENSMUST00000121420 875 ntBASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.71□□□□□ -0.53
Snrnp40Q6PE01 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms