Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gm44344-201ENSMUST00000200287 129 ntBASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Krt39Q6IFX4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm13453-201ENSMUST00000118708 357 ntBASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm27321-201ENSMUST00000185021 205 ntBASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Krt39Q6IFX4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Auts2-212ENSMUST00000178555 309 ntBASIC14.78□□□□□ -0.04
Krt39Q6IFX4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.78□□□□□ -0.04
Krt39Q6IFX4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Krt39Q6IFX4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms