Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Gm5687-201ENSMUST00000118252 640 ntBASIC16.42■□□□□ 0.22
Trim27Q62158 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim27Q62158 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.42■□□□□ 0.22
Trim27Q62158 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Gm6180-201ENSMUST00000065243 498 ntBASIC16.42■□□□□ 0.22
Trim27Q62158 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim27Q62158 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.42■□□□□ 0.22
Trim27Q62158 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trim27Q62158 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Trim27Q62158 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim27Q62158 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim27Q62158 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Trim27Q62158 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.41■□□□□ 0.22
Trim27Q62158 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Gm15371-201ENSMUST00000117057 784 ntBASIC16.41■□□□□ 0.22
Trim27Q62158 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Trim27Q62158 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim27Q62158 Gm8463-201ENSMUST00000208573 613 ntBASIC16.41■□□□□ 0.22
Trim27Q62158 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.41■□□□□ 0.22
Trim27Q62158 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Trim27Q62158 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim27Q62158 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim27Q62158 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trim27Q62158 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.4■□□□□ 0.22
Trim27Q62158 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm14928-201ENSMUST00000120198 477 ntBASIC16.4■□□□□ 0.22
Trim27Q62158 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim27Q62158 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
Trim27Q62158 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim27Q62158 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.4■□□□□ 0.22
Trim27Q62158 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trim27Q62158 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim27Q62158 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim27Q62158 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim27Q62158 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim27Q62158 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Trim27Q62158 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim27Q62158 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim27Q62158 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim27Q62158 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Trim27Q62158 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim27Q62158 Gm18018-201ENSMUST00000198273 408 ntBASIC16.39■□□□□ 0.21
Trim27Q62158 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms