Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm14704-201ENSMUST00000120300 874 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm12291-201ENSMUST00000121627 311 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm23363-201ENSMUST00000175024 79 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm44262-201ENSMUST00000204969 372 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm5904-201ENSMUST00000210286 865 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gm8959-201ENSMUST00000213150 571 ntBASIC11.12□□□□□ -0.63
Hcfc1Q61191 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hcfc1Q61191 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm27023-201ENSMUST00000182372 285 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 Mir6979-201ENSMUST00000183927 56 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm37201-201ENSMUST00000191845 523 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm15547-201ENSMUST00000122152 333 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm24749-201ENSMUST00000157838 343 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.11□□□□□ -0.63
Hcfc1Q61191 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hcfc1Q61191 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.1□□□□□ -0.63
Hcfc1Q61191 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcfc1Q61191 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms