Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm5370-201ENSMUST00000187187 574 ntBASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm29705-201ENSMUST00000212598 474 ntBASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shroom1Q5SX79 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm5187-201ENSMUST00000117317 991 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm12403-201ENSMUST00000121384 959 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Gm26315-201ENSMUST00000083890 321 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shroom1Q5SX79 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shroom1Q5SX79 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Shroom1Q5SX79 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms