Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm12585-201ENSMUST00000117307 290 ntBASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm15240-201ENSMUST00000118156 720 ntBASIC13.25□□□□□ -0.29
Scn2bQ56A07 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Gm4875-201ENSMUST00000118257 786 ntBASIC13.24□□□□□ -0.29
Scn2bQ56A07 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.24□□□□□ -0.29
Scn2bQ56A07 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.24□□□□□ -0.29
Scn2bQ56A07 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Scn2bQ56A07 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn2bQ56A07 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Gm15487-201ENSMUST00000122373 465 ntBASIC13.23□□□□□ -0.29
Scn2bQ56A07 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Gm24420-201ENSMUST00000176676 59 ntBASIC13.23□□□□□ -0.29
Scn2bQ56A07 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.23□□□□□ -0.29
Scn2bQ56A07 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn2bQ56A07 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms