Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.76■□□□□ 0.11
Limch1Q3UH68 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Limch1Q3UH68 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.75■□□□□ 0.11
Limch1Q3UH68 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Limch1Q3UH68 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.74■□□□□ 0.11
Limch1Q3UH68 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm4984-201ENSMUST00000115987 360 ntBASIC15.74■□□□□ 0.11
Limch1Q3UH68 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 AY702102-202ENSMUST00000194651 1173 ntBASIC15.74■□□□□ 0.11
Limch1Q3UH68 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm18307-201ENSMUST00000206864 949 ntBASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Limch1Q3UH68 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm11425-201ENSMUST00000119608 498 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Mir1938-201ENSMUST00000158746 100 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm27892-201ENSMUST00000185017 106 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm43630-201ENSMUST00000201550 776 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Gm9396-201ENSMUST00000076703 567 ntBASIC15.73■□□□□ 0.11
Limch1Q3UH68 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Limch1Q3UH68 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms