Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43aQ3TL54 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43aQ3TL54 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm25144-201ENSMUST00000179561 110 ntBASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm25352-201ENSMUST00000179815 110 ntBASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43aQ3TL54 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm24543-201ENSMUST00000103867 82 ntBASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm5779-201ENSMUST00000218467 910 ntBASIC14.19□□□□□ -0.14
Trim43aQ3TL54 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43aQ3TL54 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43aQ3TL54 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms