Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Gm7862-201ENSMUST00000121461 292 ntBASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hddc2Q3SXD3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hddc2Q3SXD3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hddc2Q3SXD3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hddc2Q3SXD3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Hddc2Q3SXD3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hddc2Q3SXD3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hddc2Q3SXD3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms