Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.47□□□□□ -0.09
CiitaP79621 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CiitaP79621 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CiitaP79621 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.47□□□□□ -0.09
CiitaP79621 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CiitaP79621 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.46□□□□□ -0.09
CiitaP79621 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.46□□□□□ -0.09
CiitaP79621 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.46□□□□□ -0.09
CiitaP79621 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.46□□□□□ -0.09
CiitaP79621 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CiitaP79621 Gm16202-201ENSMUST00000117532 544 ntBASIC14.46□□□□□ -0.09
CiitaP79621 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.46□□□□□ -0.09
CiitaP79621 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CiitaP79621 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CiitaP79621 Gm7029-201ENSMUST00000173226 450 ntBASIC14.46□□□□□ -0.09
CiitaP79621 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CiitaP79621 Gm45841-201ENSMUST00000207700 164 ntBASIC14.46□□□□□ -0.09
CiitaP79621 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Gm9899-201ENSMUST00000065519 555 ntBASIC14.46□□□□□ -0.09
CiitaP79621 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.46□□□□□ -0.09
CiitaP79621 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CiitaP79621 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.46□□□□□ -0.09
CiitaP79621 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CiitaP79621 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CiitaP79621 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.46□□□□□ -0.1
CiitaP79621 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CiitaP79621 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CiitaP79621 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CiitaP79621 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CiitaP79621 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CiitaP79621 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.45□□□□□ -0.1
CiitaP79621 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CiitaP79621 Gm1335-201ENSMUST00000121653 386 ntBASIC14.45□□□□□ -0.1
CiitaP79621 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.45□□□□□ -0.1
CiitaP79621 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.45□□□□□ -0.1
CiitaP79621 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.45□□□□□ -0.1
CiitaP79621 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.45□□□□□ -0.1
CiitaP79621 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CiitaP79621 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.45□□□□□ -0.1
CiitaP79621 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CiitaP79621 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CiitaP79621 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CiitaP79621 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CiitaP79621 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.44□□□□□ -0.1
CiitaP79621 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.44□□□□□ -0.1
CiitaP79621 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Gm12742-201ENSMUST00000117326 410 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Gm13392-201ENSMUST00000117708 150 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.44□□□□□ -0.1
CiitaP79621 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.44□□□□□ -0.1
CiitaP79621 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CiitaP79621 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CiitaP79621 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.44□□□□□ -0.1
CiitaP79621 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms