Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.16□□□□□ -0.46
Lsm3P62311 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.16□□□□□ -0.46
Lsm3P62311 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Lsm3P62311 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm3P62311 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.16□□□□□ -0.46
Lsm3P62311 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.15□□□□□ -0.46
Lsm3P62311 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.15□□□□□ -0.46
Lsm3P62311 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.15□□□□□ -0.46
Lsm3P62311 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Gm7230-201ENSMUST00000173026 815 ntBASIC12.15□□□□□ -0.46
Lsm3P62311 Gm27920-201ENSMUST00000183953 96 ntBASIC12.15□□□□□ -0.46
Lsm3P62311 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.15□□□□□ -0.46
Lsm3P62311 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm3P62311 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm3P62311 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm3P62311 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm3P62311 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm3P62311 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm3P62311 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Lsm3P62311 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm3P62311 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.14□□□□□ -0.47
Lsm3P62311 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.14□□□□□ -0.47
Lsm3P62311 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms