Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.11□□□□□ -0.47
Vbp1P61759 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vbp1P61759 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.11□□□□□ -0.47
Vbp1P61759 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Vbp1P61759 Gm27920-201ENSMUST00000183953 96 ntBASIC12.11□□□□□ -0.47
Vbp1P61759 Gm27300-201ENSMUST00000184085 97 ntBASIC12.11□□□□□ -0.47
Vbp1P61759 Gm27335-201ENSMUST00000184758 97 ntBASIC12.11□□□□□ -0.47
Vbp1P61759 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.11□□□□□ -0.47
Vbp1P61759 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.11□□□□□ -0.47
Vbp1P61759 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.11□□□□□ -0.47
Vbp1P61759 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vbp1P61759 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.11□□□□□ -0.47
Vbp1P61759 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.1□□□□□ -0.47
Vbp1P61759 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vbp1P61759 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.1□□□□□ -0.47
Vbp1P61759 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.1□□□□□ -0.47
Vbp1P61759 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Gm15678-201ENSMUST00000117573 960 ntBASIC12.1□□□□□ -0.47
Vbp1P61759 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.1□□□□□ -0.47
Vbp1P61759 Gm7230-201ENSMUST00000173026 815 ntBASIC12.1□□□□□ -0.47
Vbp1P61759 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.1□□□□□ -0.47
Vbp1P61759 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
Vbp1P61759 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.1□□□□□ -0.47
Vbp1P61759 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vbp1P61759 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.09□□□□□ -0.47
Vbp1P61759 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vbp1P61759 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.09□□□□□ -0.47
Vbp1P61759 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms