Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.82□□□□□ -0.36
Cdkn2bP55271 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gm14767-201ENSMUST00000121559 586 ntBASIC12.82□□□□□ -0.36
Cdkn2bP55271 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gm27618-201ENSMUST00000183671 60 ntBASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gm38294-201ENSMUST00000192831 381 ntBASIC12.82□□□□□ -0.36
Cdkn2bP55271 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.82□□□□□ -0.36
Cdkn2bP55271 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdkn2bP55271 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gm43514-201ENSMUST00000198852 424 ntBASIC12.81□□□□□ -0.36
Cdkn2bP55271 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Gm8396-201ENSMUST00000057361 823 ntBASIC12.81□□□□□ -0.36
Cdkn2bP55271 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdkn2bP55271 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.8□□□□□ -0.36
Cdkn2bP55271 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.8□□□□□ -0.36
Cdkn2bP55271 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdkn2bP55271 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms