Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx6P54823 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx6P54823 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx6P54823 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.56□□□□□ -0.24
Ddx6P54823 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx6P54823 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx6P54823 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ddx6P54823 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Ddx6P54823 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.55□□□□□ -0.24
Ddx6P54823 Gm11591-201ENSMUST00000120063 702 ntBASIC13.55□□□□□ -0.24
Ddx6P54823 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.55□□□□□ -0.24
Ddx6P54823 Mir8109-201ENSMUST00000184375 117 ntBASIC13.55□□□□□ -0.24
Ddx6P54823 Gm29396-201ENSMUST00000185659 716 ntBASIC13.55□□□□□ -0.24
Ddx6P54823 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 Gm9368-201ENSMUST00000219348 831 ntBASIC13.55□□□□□ -0.24
Ddx6P54823 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.55□□□□□ -0.24
Ddx6P54823 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Ddx6P54823 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ddx6P54823 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ddx6P54823 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ddx6P54823 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx6P54823 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Gm6023-201ENSMUST00000118217 606 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Gm12241-201ENSMUST00000118330 726 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Gm13342-201ENSMUST00000121055 207 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ddx6P54823 Gm27516-201ENSMUST00000184237 98 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Gm6458-201ENSMUST00000211573 635 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx6P54823 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Ddx6P54823 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ddx6P54823 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Ddx6P54823 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.54□□□□□ -0.24
Ddx6P54823 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx6P54823 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.54□□□□□ -0.24
Ddx6P54823 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx6P54823 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.53□□□□□ -0.24
Ddx6P54823 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.53□□□□□ -0.24
Ddx6P54823 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ddx6P54823 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ddx6P54823 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ddx6P54823 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx6P54823 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ddx6P54823 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms