Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm6888-201ENSMUST00000221983 706 ntBASIC12.94□□□□□ -0.34
Tnfsf4P43488 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf4P43488 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gm6736-201ENSMUST00000166583 948 ntBASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gm22175-201ENSMUST00000175007 78 ntBASIC12.93□□□□□ -0.34
Tnfsf4P43488 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gm27772-201ENSMUST00000184900 187 ntBASIC12.93□□□□□ -0.34
Tnfsf4P43488 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.93□□□□□ -0.34
Tnfsf4P43488 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf4P43488 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf4P43488 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.93□□□□□ -0.34
Tnfsf4P43488 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.92□□□□□ -0.34
Tnfsf4P43488 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.92□□□□□ -0.34
Tnfsf4P43488 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.92□□□□□ -0.34
Tnfsf4P43488 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.92□□□□□ -0.34
Tnfsf4P43488 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.92□□□□□ -0.34
Tnfsf4P43488 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tnfsf4P43488 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tnfsf4P43488 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms