Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Gm28182-201ENSMUST00000188354 2477 ntBASIC19.62■□□□□ 0.73
Chd1P40201 Gm12628-201ENSMUST00000122193 382 ntBASIC19.62■□□□□ 0.73
Chd1P40201 Gm23085-201ENSMUST00000157849 293 ntBASIC19.62■□□□□ 0.73
Chd1P40201 Mir7221-201ENSMUST00000184009 72 ntBASIC19.62■□□□□ 0.73
Chd1P40201 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Chd1P40201 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Chd1P40201 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.62■□□□□ 0.73
Chd1P40201 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC19.62■□□□□ 0.73
Chd1P40201 Mir6998-201ENSMUST00000183343 64 ntBASIC19.62■□□□□ 0.73
Chd1P40201 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC19.62■□□□□ 0.73
Chd1P40201 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC19.62■□□□□ 0.73
Chd1P40201 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chd1P40201 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Chd1P40201 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC19.61■□□□□ 0.73
Chd1P40201 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chd1P40201 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC19.61■□□□□ 0.73
Chd1P40201 Gm6905-201ENSMUST00000205729 511 ntBASIC19.61■□□□□ 0.73
Chd1P40201 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC19.61■□□□□ 0.73
Chd1P40201 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chd1P40201 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chd1P40201 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Chd1P40201 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC19.6■□□□□ 0.73
Chd1P40201 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.6■□□□□ 0.73
Chd1P40201 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chd1P40201 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Gm22133-201ENSMUST00000102082 109 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Gm23596-201ENSMUST00000104304 132 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Gm13600-201ENSMUST00000117949 744 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Gm13937-201ENSMUST00000121000 988 ntBASIC19.59■□□□□ 0.73
Chd1P40201 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC19.59■□□□□ 0.73
Chd1P40201 Gm6867-201ENSMUST00000219165 425 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Mirlet7i-201ENSMUST00000083472 85 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chd1P40201 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Chd1P40201 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
Chd1P40201 Gm14921-201ENSMUST00000118643 908 ntBASIC19.59■□□□□ 0.73
Chd1P40201 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC19.59■□□□□ 0.73
Chd1P40201 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC19.59■□□□□ 0.73
Chd1P40201 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC19.59■□□□□ 0.73
Chd1P40201 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
Chd1P40201 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC19.59■□□□□ 0.73
Chd1P40201 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC19.59■□□□□ 0.73
Chd1P40201 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC19.59■□□□□ 0.73
Chd1P40201 Prrxl1-205ENSMUST00000228878 723 ntBASIC19.59■□□□□ 0.73
Chd1P40201 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chd1P40201 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chd1P40201 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.58■□□□□ 0.73
Chd1P40201 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chd1P40201 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms