Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.32□□□□□ -0.44
Sftpa1P35242 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.32□□□□□ -0.44
Sftpa1P35242 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Sftpa1P35242 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.32□□□□□ -0.44
Sftpa1P35242 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sftpa1P35242 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.32□□□□□ -0.44
Sftpa1P35242 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sftpa1P35242 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.31□□□□□ -0.44
Sftpa1P35242 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.31□□□□□ -0.44
Sftpa1P35242 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Gm26185-201ENSMUST00000157692 266 ntBASIC12.31□□□□□ -0.44
Sftpa1P35242 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.31□□□□□ -0.44
Sftpa1P35242 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.31□□□□□ -0.44
Sftpa1P35242 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.31□□□□□ -0.44
Sftpa1P35242 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.31□□□□□ -0.44
Sftpa1P35242 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.31□□□□□ -0.44
Sftpa1P35242 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sftpa1P35242 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sftpa1P35242 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.3□□□□□ -0.44
Sftpa1P35242 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sftpa1P35242 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms