Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Nedd8P29595 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.32□□□□□ -0.44
Nedd8P29595 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Nedd8P29595 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.32□□□□□ -0.44
Nedd8P29595 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Nedd8P29595 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nedd8P29595 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm7284-201ENSMUST00000131667 944 ntBASIC12.32□□□□□ -0.44
Nedd8P29595 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm6659-201ENSMUST00000174752 547 ntBASIC12.32□□□□□ -0.44
Nedd8P29595 Gm27920-201ENSMUST00000183953 96 ntBASIC12.32□□□□□ -0.44
Nedd8P29595 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.32□□□□□ -0.44
Nedd8P29595 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.32□□□□□ -0.44
Nedd8P29595 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nedd8P29595 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nedd8P29595 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.31□□□□□ -0.44
Nedd8P29595 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.31□□□□□ -0.44
Nedd8P29595 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.31□□□□□ -0.44
Nedd8P29595 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.31□□□□□ -0.44
Nedd8P29595 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nedd8P29595 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nedd8P29595 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms