Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm27772-201ENSMUST00000184900 187 ntBASIC12.54□□□□□ -0.4
Clk1P22518 Gm18905-201ENSMUST00000205454 928 ntBASIC12.54□□□□□ -0.4
Clk1P22518 Gm3222-201ENSMUST00000071282 990 ntBASIC12.54□□□□□ -0.4
Clk1P22518 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Clk1P22518 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clk1P22518 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Clk1P22518 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.53□□□□□ -0.4
Clk1P22518 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.53□□□□□ -0.4
Clk1P22518 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Clk1P22518 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.53□□□□□ -0.4
Clk1P22518 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.53□□□□□ -0.4
Clk1P22518 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.53□□□□□ -0.4
Clk1P22518 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.53□□□□□ -0.4
Clk1P22518 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clk1P22518 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
Clk1P22518 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Clk1P22518 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Clk1P22518 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clk1P22518 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Clk1P22518 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.52□□□□□ -0.41
Clk1P22518 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.52□□□□□ -0.41
Clk1P22518 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.52□□□□□ -0.41
Clk1P22518 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.52□□□□□ -0.41
Clk1P22518 Gm24694-201ENSMUST00000180054 110 ntBASIC12.52□□□□□ -0.41
Clk1P22518 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.52□□□□□ -0.41
Clk1P22518 Gm27663-201ENSMUST00000184839 110 ntBASIC12.52□□□□□ -0.41
Clk1P22518 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Clk1P22518 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.52□□□□□ -0.41
Clk1P22518 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.52□□□□□ -0.41
Clk1P22518 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clk1P22518 Mir497b-201ENSMUST00000093601 125 ntBASIC12.52□□□□□ -0.41
Clk1P22518 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms