Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tnfrsf9P20334 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm5354-201ENSMUST00000182417 973 ntBASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm33320-201ENSMUST00000192232 530 ntBASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm37002-201ENSMUST00000194560 373 ntBASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tnfrsf9P20334 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm12585-201ENSMUST00000117307 290 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm17420-201ENSMUST00000164753 153 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm6244-201ENSMUST00000178732 841 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Gm10478-201ENSMUST00000084451 396 ntBASIC11.06□□□□□ -0.64
Tnfrsf9P20334 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms