Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hmgn1P18608 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmgn1P18608 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.25□□□□□ -0.45
Hmgn1P18608 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Mir1897-201ENSMUST00000122581 272 ntBASIC12.24□□□□□ -0.45
Hmgn1P18608 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.24□□□□□ -0.45
Hmgn1P18608 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn1P18608 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hmgn1P18608 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.24□□□□□ -0.45
Hmgn1P18608 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn1P18608 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn1P18608 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
Hmgn1P18608 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn1P18608 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn1P18608 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn1P18608 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.22□□□□□ -0.45
Hmgn1P18608 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms