Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl3P10855 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm17208-201ENSMUST00000168388 535 ntBASIC11.76□□□□□ -0.53
Ccl3P10855 Gm8738-201ENSMUST00000172606 329 ntBASIC11.76□□□□□ -0.53
Ccl3P10855 Mir5132-201ENSMUST00000175166 71 ntBASIC11.76□□□□□ -0.53
Ccl3P10855 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.76□□□□□ -0.53
Ccl3P10855 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.76□□□□□ -0.53
Ccl3P10855 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccl3P10855 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccl3P10855 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccl3P10855 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccl3P10855 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccl3P10855 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ccl3P10855 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Ccl3P10855 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Gm10434-201ENSMUST00000101158 471 ntBASIC11.75□□□□□ -0.53
Ccl3P10855 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccl3P10855 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Gm12997-201ENSMUST00000120207 640 ntBASIC11.75□□□□□ -0.53
Ccl3P10855 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccl3P10855 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ccl3P10855 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccl3P10855 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccl3P10855 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.75□□□□□ -0.53
Ccl3P10855 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccl3P10855 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccl3P10855 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccl3P10855 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccl3P10855 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Ccl3P10855 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccl3P10855 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Gm11978-201ENSMUST00000122315 466 ntBASIC11.74□□□□□ -0.53
Ccl3P10855 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Mir7070-201ENSMUST00000183657 86 ntBASIC11.74□□□□□ -0.53
Ccl3P10855 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccl3P10855 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ccl3P10855 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccl3P10855 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.74□□□□□ -0.53
Ccl3P10855 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.74□□□□□ -0.53
Ccl3P10855 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccl3P10855 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccl3P10855 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms