Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vti1aO89116 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1aO89116 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.42□□□□□ -0.1
Vti1aO89116 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.42□□□□□ -0.1
Vti1aO89116 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.42□□□□□ -0.1
Vti1aO89116 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Vti1aO89116 Gm5370-201ENSMUST00000187187 574 ntBASIC14.42□□□□□ -0.1
Vti1aO89116 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.42□□□□□ -0.1
Vti1aO89116 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.42□□□□□ -0.1
Vti1aO89116 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vti1aO89116 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.42□□□□□ -0.1
Vti1aO89116 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.42□□□□□ -0.1
Vti1aO89116 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.42□□□□□ -0.1
Vti1aO89116 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.42□□□□□ -0.1
Vti1aO89116 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Vti1aO89116 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.42□□□□□ -0.1
Vti1aO89116 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1aO89116 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vti1aO89116 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vti1aO89116 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Vti1aO89116 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.41□□□□□ -0.1
Vti1aO89116 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.41□□□□□ -0.1
Vti1aO89116 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1aO89116 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1aO89116 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.41□□□□□ -0.1
Vti1aO89116 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Vti1aO89116 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.4□□□□□ -0.1
Vti1aO89116 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.4□□□□□ -0.1
Vti1aO89116 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vti1aO89116 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Vti1aO89116 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.4□□□□□ -0.1
Vti1aO89116 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms