Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm13689-201ENSMUST00000119360 685 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm11918-201ENSMUST00000121660 179 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm28911-201ENSMUST00000188837 117 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm38223-201ENSMUST00000194484 695 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm45384-201ENSMUST00000210451 277 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.59□□□□□ -0.39
Cx3cl1O35188 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cx3cl1O35188 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cx3cl1O35188 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Cx3cl1O35188 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gm15371-201ENSMUST00000117057 784 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gm42550-201ENSMUST00000201553 960 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.58□□□□□ -0.4
Cx3cl1O35188 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cx3cl1O35188 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm12403-201ENSMUST00000121384 959 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm11424-201ENSMUST00000121929 829 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm12138-201ENSMUST00000122180 951 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm15429-201ENSMUST00000151268 798 ntBASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cx3cl1O35188 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms