Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Gm23931-201ENSMUST00000103842 109 ntBASIC13.91□□□□□ -0.18
Ebf3O08791 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.91□□□□□ -0.18
Ebf3O08791 Gm16177-201ENSMUST00000120728 718 ntBASIC13.91□□□□□ -0.18
Ebf3O08791 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.91□□□□□ -0.18
Ebf3O08791 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.91□□□□□ -0.18
Ebf3O08791 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.91□□□□□ -0.18
Ebf3O08791 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ebf3O08791 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.91□□□□□ -0.18
Ebf3O08791 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.91□□□□□ -0.18
Ebf3O08791 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ebf3O08791 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ebf3O08791 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ebf3O08791 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ebf3O08791 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.9□□□□□ -0.18
Ebf3O08791 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Ebf3O08791 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ebf3O08791 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.9□□□□□ -0.18
Ebf3O08791 Proscos-202ENSMUST00000178990 666 ntBASIC13.9□□□□□ -0.18
Ebf3O08791 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.9□□□□□ -0.18
Ebf3O08791 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.9□□□□□ -0.18
Ebf3O08791 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ebf3O08791 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ebf3O08791 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ebf3O08791 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Ebf3O08791 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.9□□□□□ -0.18
Ebf3O08791 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.9□□□□□ -0.18
Ebf3O08791 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.9□□□□□ -0.18
Ebf3O08791 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf3O08791 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ebf3O08791 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ebf3O08791 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.89□□□□□ -0.19
Ebf3O08791 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ebf3O08791 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Gm43179-201ENSMUST00000198797 275 ntBASIC13.89□□□□□ -0.19
Ebf3O08791 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms