Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm11618-201ENSMUST00000117946 267 ntBASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm45880-201ENSMUST00000213041 853 ntBASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Srp54bE9PXC0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm14350-201ENSMUST00000116642 640 ntBASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm15198-201ENSMUST00000117283 177 ntBASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm7399-201ENSMUST00000032395 858 ntBASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Gm10268-201ENSMUST00000085340 555 ntBASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Srp54bE9PXC0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Srp54bE9PXC0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms