Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Mir7032-201ENSMUST00000185154 79 ntBASIC11.28□□□□□ -0.6
Col6a4A2AX52 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.28□□□□□ -0.6
Col6a4A2AX52 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col6a4A2AX52 Gm11439-201ENSMUST00000118598 409 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Gm43947-201ENSMUST00000203019 959 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Gm17330-201ENSMUST00000221047 165 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.27□□□□□ -0.6
Col6a4A2AX52 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Col6a4A2AX52 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm15770-201ENSMUST00000117498 584 ntBASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm13461-201ENSMUST00000120980 662 ntBASIC11.27□□□□□ -0.61
Col6a4A2AX52 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm45186-201ENSMUST00000206874 478 ntBASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.27□□□□□ -0.61
Col6a4A2AX52 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col6a4A2AX52 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.27□□□□□ -0.61
Col6a4A2AX52 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gm8805-201ENSMUST00000117848 313 ntBASIC11.26□□□□□ -0.61
Col6a4A2AX52 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col6a4A2AX52 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms