Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc112A0AUP1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Mir7221-201ENSMUST00000184009 72 ntBASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc112A0AUP1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gm17795-201ENSMUST00000214505 757 ntBASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc112A0AUP1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc112A0AUP1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms