Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Mir449b-201ENSMUST00000104833 80 ntBASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gm44771-201ENSMUST00000206975 626 ntBASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trbv29A0A0G2LB96 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Gm45841-201ENSMUST00000207700 164 ntBASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trbv29A0A0G2LB96 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Gm15240-201ENSMUST00000118156 720 ntBASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.1□□□□□ -0.63
Trbv29A0A0G2LB96 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms