Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcb1Q9Z0H3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Gm23931-201ENSMUST00000103842 109 ntBASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcb1Q9Z0H3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcb1Q9Z0H3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms