Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm14701-201ENSMUST00000117156 348 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm4875-201ENSMUST00000118257 786 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm26308-201ENSMUST00000157768 69 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm6736-201ENSMUST00000166583 948 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm27772-201ENSMUST00000184900 187 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm7775-201ENSMUST00000218871 853 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.79□□□□□ -0.36
VapaQ9WV55 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
VapaQ9WV55 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VapaQ9WV55 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Mir874-201ENSMUST00000104769 76 ntBASIC12.78□□□□□ -0.36
VapaQ9WV55 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm13223-201ENSMUST00000118609 747 ntBASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm17837-201ENSMUST00000186435 985 ntBASIC12.78□□□□□ -0.36
VapaQ9WV55 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm45841-201ENSMUST00000207700 164 ntBASIC12.78□□□□□ -0.36
VapaQ9WV55 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm17330-201ENSMUST00000221047 165 ntBASIC12.78□□□□□ -0.36
VapaQ9WV55 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VapaQ9WV55 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VapaQ9WV55 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
VapaQ9WV55 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
VapaQ9WV55 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VapaQ9WV55 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
VapaQ9WV55 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VapaQ9WV55 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
VapaQ9WV55 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VapaQ9WV55 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm13453-201ENSMUST00000118708 357 ntBASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.77□□□□□ -0.37
VapaQ9WV55 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VapaQ9WV55 Mir7221-201ENSMUST00000184009 72 ntBASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm43575-201ENSMUST00000196420 516 ntBASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.77□□□□□ -0.37
VapaQ9WV55 Gm9063-201ENSMUST00000223299 582 ntBASIC12.77□□□□□ -0.37
VapaQ9WV55 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VapaQ9WV55 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms