Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.08□□□□□ -0.32
Cdh17Q9R100 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Gm27306-201ENSMUST00000183970 107 ntBASIC13.07□□□□□ -0.32
Cdh17Q9R100 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.07□□□□□ -0.32
Cdh17Q9R100 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.07□□□□□ -0.32
Cdh17Q9R100 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.07□□□□□ -0.32
Cdh17Q9R100 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Cdh17Q9R100 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh17Q9R100 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.06□□□□□ -0.32
Cdh17Q9R100 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm9522-201ENSMUST00000182394 926 ntBASIC13.06□□□□□ -0.32
Cdh17Q9R100 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm5161-201ENSMUST00000075243 853 ntBASIC13.06□□□□□ -0.32
Cdh17Q9R100 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.06□□□□□ -0.32
Cdh17Q9R100 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdh17Q9R100 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
Cdh17Q9R100 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms