Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm7284-201ENSMUST00000131667 944 ntBASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm6550-201ENSMUST00000187574 993 ntBASIC11.32□□□□□ -0.6
Six6Q9QZ28 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm44719-201ENSMUST00000206404 149 ntBASIC11.32□□□□□ -0.6
Six6Q9QZ28 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.32□□□□□ -0.6
Six6Q9QZ28 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.32□□□□□ -0.6
Six6Q9QZ28 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six6Q9QZ28 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six6Q9QZ28 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.3□□□□□ -0.6
Six6Q9QZ28 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Gm13597-201ENSMUST00000121239 375 ntBASIC11.3□□□□□ -0.6
Six6Q9QZ28 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.3□□□□□ -0.6
Six6Q9QZ28 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms