Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ClpxQ9JHS4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClpxQ9JHS4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
ClpxQ9JHS4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Gm13015-201ENSMUST00000118674 204 ntBASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.27□□□□□ -0.45
ClpxQ9JHS4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClpxQ9JHS4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Gm15693-201ENSMUST00000120470 637 ntBASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClpxQ9JHS4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms