Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
U2af1Q9D883 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.6■□□□□ 0.41
U2af1Q9D883 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
U2af1Q9D883 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Gm22331-201ENSMUST00000158066 136 ntBASIC17.6■□□□□ 0.41
U2af1Q9D883 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Gm29649-201ENSMUST00000185649 419 ntBASIC17.6■□□□□ 0.41
U2af1Q9D883 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
U2af1Q9D883 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
U2af1Q9D883 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
U2af1Q9D883 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
U2af1Q9D883 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Gm8213-201ENSMUST00000118191 441 ntBASIC17.59■□□□□ 0.41
U2af1Q9D883 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.59■□□□□ 0.41
U2af1Q9D883 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.59■□□□□ 0.41
U2af1Q9D883 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
U2af1Q9D883 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
U2af1Q9D883 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.59■□□□□ 0.41
U2af1Q9D883 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
U2af1Q9D883 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
U2af1Q9D883 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.58■□□□□ 0.41
U2af1Q9D883 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.58■□□□□ 0.41
U2af1Q9D883 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.58■□□□□ 0.41
U2af1Q9D883 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
U2af1Q9D883 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.58■□□□□ 0.41
U2af1Q9D883 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Gm24644-201ENSMUST00000157114 139 ntBASIC17.58■□□□□ 0.4
U2af1Q9D883 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.58■□□□□ 0.4
U2af1Q9D883 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.58■□□□□ 0.4
U2af1Q9D883 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
U2af1Q9D883 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.58■□□□□ 0.4
U2af1Q9D883 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
U2af1Q9D883 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
U2af1Q9D883 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
U2af1Q9D883 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms