Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.93■□□□□ 0.14
Stag1Q9D3E6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Gm27501-201ENSMUST00000183599 107 ntBASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Gm43118-201ENSMUST00000199149 775 ntBASIC15.92■□□□□ 0.14
Stag1Q9D3E6 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Stag1Q9D3E6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Gm2231-201ENSMUST00000125661 612 ntBASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Gm45930-201ENSMUST00000221330 292 ntBASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Stag1Q9D3E6 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Mir8109-201ENSMUST00000184375 117 ntBASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Gm42627-201ENSMUST00000197347 224 ntBASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Stag1Q9D3E6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms