Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RTRAFQ9CQE8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.89□□□□□ -0.67
RTRAFQ9CQE8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RTRAFQ9CQE8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RTRAFQ9CQE8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RTRAFQ9CQE8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RTRAFQ9CQE8 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Gm15957-201ENSMUST00000118893 974 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Gm29741-201ENSMUST00000192667 421 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
RTRAFQ9CQE8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
RTRAFQ9CQE8 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms