Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Gm27627-201ENSMUST00000183644 150 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Gm25517-201ENSMUST00000083865 134 ntBASIC14.78□□□□□ -0.04
Pcdh15Q99PJ1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 AY036118-201ENSMUST00000200021 923 ntBASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh15Q99PJ1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.77□□□□□ -0.05
Pcdh15Q99PJ1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Gm13035-201ENSMUST00000117496 342 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Mir7686-201ENSMUST00000200604 57 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Gm14999-201ENSMUST00000121039 624 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Mir7221-201ENSMUST00000184009 72 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh15Q99PJ1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh15Q99PJ1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms